Q.42 Kinetic parameters for the enzyme fumarase with three different substrates are given below.
Substrate 𝐊𝐌(𝝁𝐌) 𝐤cat (𝐬𝐞𝐜−𝟏)
Fluorofumarate 27 2700
Fumarate 5 800
Chlorofumarate 111 20
The specificity of fumarase for the substrates decreases in the order
(A) Fluorofumarate > Fumarate > Chlorofumarate
(B) Chlorofumarate > Fluorofumarate > Fumarate
(C) Fumarate > Fluorofumarate > Chlorofumarate
(D) Fumarate > Chlorofumarate > Fluorofumarate
Correct answer: (C) Fumarate > Fluorofumarate > Chlorofumarate. The specificity of an enzyme for a substrate is compared using the catalytic efficiency kcat/KM, and this value is highest for fumarate here.
How to Determine Enzyme Specificity
Enzyme specificity for different substrates is compared using catalytic efficiency, given by the ratio kcat/KM.
- A higher kcat means the enzyme turns over substrate faster per active site per second.
- A lower KM means higher affinity of the enzyme for the substrate.
Given kinetic data and catalytic efficiency
Fluorofumarate:
kcat/KM = 2700 / 27 = 100 (sec−1 μM−1)
Fumarate:
kcat/KM = 800 / 5 = 160 (sec−1 μM−1)
Chlorofumarate:
kcat/KM = 20 / 111 ≈ 0.18 (sec−1 μM−1)
Thus, specificity (catalytic efficiency) decreases in the order:
Fumarate (160) > Fluorofumarate (100) > Chlorofumarate (0.18).
So the correct option is (C) Fumarate > Fluorofumarate > Chlorofumarate.
Explanation of Each Option
Option (A) Fluorofumarate > Fumarate > Chlorofumarate
This option incorrectly places fluorofumarate above fumarate in specificity. Since fumarate has a higher kcat/KM (160) than fluorofumarate (100), fumarase is more specific for fumarate, not fluorofumarate, so this option is wrong.
Option (B) Chlorofumarate > Fluorofumarate > Fumarate
This option is incorrect because it places chlorofumarate as the most specific substrate, but chlorofumarate shows both high KM (low affinity) and very low kcat (slow turnover). Its very low kcat/KM (~0.18) makes it the least preferred substrate for fumarase.
Option (C) Fumarate > Fluorofumarate > Chlorofumarate
This option correctly follows the descending order of kcat/KM: fumarate (160) > fluorofumarate (100) > chlorofumarate (~0.18). Fumarate is also the natural substrate of fumarase in the TCA cycle, and typically shows the highest specificity, consistent with this order.
Option (D) Fumarate > Chlorofumarate > Fluorofumarate
This option correctly places fumarate first but wrongly places chlorofumarate ahead of fluorofumarate. Since fluorofumarate has a much higher kcat/KM than chlorofumarate, fumarase is more specific for fluorofumarate than for chlorofumarate, so this order is incorrect.