1. Following statements were made about stress response in prokaryotes: A. PerR functions as a major peroxide sensor in many Gram- positive bacteria. B. Extreme acidic pH induces RecA-mediated DNA damage, which in turn may induce Virulence gene expression in some pathogenic bacteria. C. Induced expression of heat shock proteins neither protects the cells from heat nor plays a role in D. In Gram-negative bacteria, heat shock factor regulates the transcription of the major heat shock E. GroES is an ATP-dependent chaperonin but GroELmay function in ATP-independent manner. Which one of the following represents the correct combination of above statements? (1) A, C, D (2) A, B, D (3) B, C, E (4) B, D, E

Prokaryotic Stress Response: PerR, RecA, Heat Shock Proteins, and Chaperonins in Oxidative, Acidic, and Thermal Stress

30. In a form of stress response, bacteria synthesize a group of proteins called stress proteins (or heat shock proteins) such as DnaK,DnaJ, GroEL, GroES, and GrpE. DnaK is an ATP bjnding protein, which attaches newly synthesized polypeptide in conjunction DnaJ. Which one of the following statements correctly states a step in the subsequent process of protein folding? (1) The affinity of DnaK to the polypeptide upon hydrolysis of the ATP to ADP. (2) DnaJ is an exchange factor that replaces ADP to ATP in DnaK (3) ATP hydrolysis is required for the phosphorylatjonof DnaJ (4) ATP hydrolysis is required for the phosphorylation of GrpE

Understanding the Role of Bacterial Stress Proteins: DnaK, DnaJ, GroEL, GroES, and GrpE in ATP-Dependent Protein Folding

The following statements were made regarding the role of protein modifications A. Attachment of acetyl groups to the amino termini of proteins makes it more resistant to degradation. B. Attachment of hydroxyl groups to proline residues stabilizes fibres of newly synthesized collagen C. Addition of sugars (glycosylation) makes protein more hydrophilic enabling protein-protein interactions D. Addition of sugars (glycosylation) makes protein more hydrophobic enabling protein folding Which one of the following combinations represents all correct statements? (1) A, B and C (2) A, B and D (3) B and C only (4) A and D only

The Role of Protein Modifications: Acetylation, Hydroxylation, and Glycosylation in Degradation, Folding, and Protein-Protein Interactions

The following statements were made regarding the role of protein modifications A. Attachment of acetyl groups to the amino termini of proteins makes it more resistant to degradation. B. Attachment of hydroxyl groups to proline residues stabilizes fibres of newly synthesized collagen C. Addition of sugars (glycosylation) makes protein more hydrophilic enabling protein-protein interactions D. Addition of sugars (glycosylation) makes protein more hydrophobic enabling protein folding Which one of the following combinations represents all correct statements? (1) A, B and C       (2) A, B and D (3) B and C only   (4) A and D only

The Role of Protein Modifications: Acetylation, Hydroxylation, and Glycosylation in Degradation, Folding, and Protein-Protein Interactions

Which one of following modification of proteins is co translational? (1) Palmitoylation (2) Myristoylation (3) Famesylation (4) addition of cholesterol  

Understanding Co-Translational Protein Modification: Myristoylation vs. Palmitoylation, Farnesylation, and Cholesterol Addition

In m-RNA immature termination occurs due to stop codon UAA. Which of the following transition mutation will lead to its reversal? (1) Change at first U (2) Change at first A (3) Change at second A (4) All of the above

Understanding mRNA Premature Termination: How Transition Mutations in UAA Stop Codon Can Reverse Immature Termination

During translation in prokaryotes, when ribosomes reach the termination codon, the termination codon is recognized by the class I release factors (RF1 or RF2) leading to the release of the polypeptide. A second class II release factor (RF3) facilitates the termination process. Which of the following statements regarding the mechanism of action of the release factors is INCORRECT? (1) Class I release factors decode the stop codons while the RF3 is a GTPase that stimulates recycling of the class I release factors. (2) Free RF3 has a higher affinity for GTP than GDP (3) RF1 and RF2 share a conserved segment of 'GGQ' sequence which is essential for the polypeptide release. (4) RF1 and RF2, individually possess another stretch of tripeptide sequences which are involved in the recognition of the termination codons.

Prokaryotic Translation Termination: Mechanism of Release Factors RF1, RF2, and RF3 in Stop Codon Recognition and Polypeptide Release

During elongation step or protein synthesis, translocation moves the mRNA and the peptidyl t-RNA by one codon through the ribosome. Translocation in E.coli involves GTP and EF-G. However, in vitro translocation can take place independent of GTP and EF-G. Based on these observations, the following hypotheses can be made: (A) The molecular mechanism of translocation in vitro is completely different from that in vivo. (B) Translocation activity is independent of GTP hydrolysis. (C) Translocation activity is completely dependent on GTP and EF-G. (D) Translocation activity is inherent in ribosomes, however, the rate of translocation in vivo is enhanced significantly in presence of GTP and EF-G Which one of the following combinations is correct? (1) only (D)         (2) (A) and (C) (3) (A) and (B)    (4) (C) and (D)

Ribosomal Translocation in E. coli: Mechanism, GTP/EF-G Dependence, and In Vitro vs. In Vivo Dynamics

A protein has 4 equally spaced trypsin sensitive sites which results in peptide fragments A1, A2, A3, A4 and A5 upon digestion with trypsin. Peptides A2 and As, represents N-terminal and C-terminal fragments respectively. Now you are asked to synthesis this protein. At time t = O you added all the 20 amino acids labelled with 14C and initiated the synthesis. At time t = 4, full length protein is synthesized. If you stop the synthesis of the protein in time t = 1 and digest the protein with trypsin, which peptide will have maximum 14C label than others? (1)A3              (2) A1 (3) A4              (4) A2    

Protein Synthesis and Trypsin Digestion: Which Peptide Fragment Carries Maximum 14C Label at Early Synthesis Stage?

For continuation of protein synthesis in bacteria, ribosome need to be released from the mRNA as well as to dissociate into subunits. These processes do not occur spontaneously. They need the following possible conditions: A. RRF and EF-G aid in this process B. An intrinsic activity of ribosomes and all uncharged tRNA are required C. If-1 promotes dissociation of ribosomes D. If-3 promote dissociation of ribosome Which of the following sets is correct? (1) A and D      (2) A and B (3) A and C     (4) B and D

Ribosome Recycling in Bacteria: The Essential Roles of RRF and EF-G

Which one of the following translation factors is used at the step Of translation initiation and defined as anti- association factor for 30S and 50S subunit interactions? (1) IF1          (2) IF2 (3) IF3         (4) RRF

Translation Initiation Factor IF3: The Anti-Association Factor for 30S and 50S Ribosomal

Presence of an internal ribosomal entry site (IRES) in mRNA (1) Inhibit its translation (2) promotes its post transcriptional processing (3) has no impact on its translation (4) promotes its translation under adverse conditions

How Internal Ribosomal Entry Sites Promote Translation Under Stress

15. It has been observed that in 5-10% of the eukaryotic mRNAs with multiple AUGs, the first AUG is not the initiation site, In such cases, the ribosome skips over one or more AUGs before encountering the favorable one and initiating translation. This is postulated to be due to the presence of the following consensus sequence (S): (A) CCA CC AUG G (B) CCG CC AUG G (C) CCGCC AUG C (D) AAC GG AUG A Which of the following sequence sets related to the above postulations is correct? (1) A and B (2) A and C (3) cand D (4) B and D

Why the First AUG Isn’t Always the Start in Eukaryotic mRNAs

During translation when release factor binds to stop codon on m-RNA in A-site of ribosome, the synthesized translation peptide transferred to (1) t-RNA            (2) Water (3) H+(4) Amino acids

During Translation Termination the Release Factor Binds to Stop Codon

12. The most critial step during elongation for correct proteins synthesis is (1) Binding of ribosome to m.RNA (2) Formation Initiation complex (3) Aminoacylation of t-RNA (4) Translocation Of ribosome

The Critical Step During Elongation of Translation is Translocation of the Ribosome

Which the following names is appropriate for the sequence 5'-G/ANNAUG -3' in a mammalian mRNA? (1) Shine-Dalgarno sequence (2) Kozak sequence (3) Internal ribosome entry Sites (4) Translation termination site

What Is the Kozak Sequence

During protein synthesis in prokaryotes, the peptidyl transferase activity required for peptide bond is due to (1) ribosomal protein L26. (2) 16S ribosomal RNA. (3) 23S ribosomal RNA. (4) aminoacyltRNA.

Peptidyl Transferase Activity in Prokaryotic Protein Synthesis

 During protein synthesis in E. coli the initiating methionine (AUG) and the internal methionine (AUG) codons of a given mRNA are distinguished by (1) fmet-tRNAf and met-tRNAm respectively (2) fmet-tRNAf , IF-2 versus met-tRNAm-EF-Turespectively (3) fmet-tRNAf + 30 S ribosomal  subunit versus met- tRNAm + 50 S ribosomal subunit respectively (4) fmet-tRNAf, IF-2 versus fmet-tRNAf-EF-Tu respectively

How E. coli Distinguishes Initiating and Internal Methionine Codons

8. Which one Of the following RNAs possesses the peptidyl transferase activity? (1) tRNA (2) 2.5S rRNA (3) 16S Rrna(4) 23S rRNA

Which RNA Carries Peptidyl Transferase Activity

 Which one of the following statements about eukaryotic translation is NOT true? (1) ribosome binding site on mRNA is called Kozak consensus sequences. (2) initiatortRNA is tRNAf-met (3) initiator amino acid is methionine. (4) translocation factor is eEF2.

Which Statement About Eukaryotic Translation Is NOT True?

In prokaryotes IF-2 binds to (1) Initiator t-RNA and GTP (2) Amino acyl t-RNA and ATP (3) Ribosome and m-RNA (4) m-RNA and 30 S subunit of ribosome 

Prokaryotic Translation Initiation: The Role of IF-2 and Initiator t-RNA

What is the minimum number Of NTPs required for the formation of one peptide bond during protein synthesis? (1) One       (2) Two   (3) Four     (4) Six

Minimum Number of NTPs Required for One Peptide Bond

During each cycle of chain elongation in translation, how many conformational changes does the ribosome undergo that are coupled to GTP hydrolysis? (1) Zero (2) one (3) Two (4) Three

During Each Cycle of elongation in Translation Ribosome Undergo conformational changes

2. If a sequence 5’- AAA(AAA)nAAAAAC-3' was transcribed in cell free system and peptide obtained was partially hydrolyzed with carboxypeptidase, the result was an Asparagine residue and oligopeptide. It suggest the direction of translation was (1) N terminus to C terminus (2) C terminus to N terminus (3) 3'-5' at pH 7.2 (4) 5'-3'at pH 5.3

The mRNA Sequence and Its Translation Direction

Among the following which process do not occur in nucleus (1) Replication(2) Transcription (3) Translation       (4) Repair

Process Does Not Occur in the Nucleus | Transcription

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