In an alpha helical polypeptide, the backbone hydrogen bonds are between (1) NH of n and CO of n + 4 amino acids (2) CO of n and NH of […]
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Collagen Triple Helix Position in the Ramachandran Plot
The position of collagen triple helix in Ramachandran plot is at- (1) Top Left (2) Top right (3) Bottom right (4) Bottom left Collagen Triple Helix Position in the Ramachandran […]
Dihedral Angles (ϕ, Ψ) in α-Helical Peptides: Acetyl-(Ala)18-CONH2
Acetyl-(Ala)18-CONH2 exists in α-helical conformation in solution. Most of the backbone dihedral angles (φ, Ψ) will be. (1) -600, -300 (2) 600,300 (3) -600 ,-300 (50%) and 600, 300 (50%) […]
Understanding Dihedral Angles and Secondary Structures
Which one of the statements on protein conformation, detailed below is INCORRECT? (1) L- amino acids can occur in Type l’ ß- turns where ϕ, Ψ are positive (2) A […]
ϕ and Ψ Angles in Right-Handed α-Helices of L-Amino Acids
ϕ and Ψ values for right handed a helix of L-amino acid are expected to be (1) ϕ Negative, Ψ negative (2) ϕ Negative, Ψ positive (3) ϕ Positive, Ψ […]
Understanding Protein Conformation: Key Facts
Which one of the following statements on protein conformation is NOT true? (1) Dihedral angles of side-chains in amino acids are depicted in the Ramachandran plot. (2) Infrared spectroscopy can […]
Secondary Structure Regions in the Ramachandran Plot
9. The regions of phi, psi space occupied by well characterized protein secondary structures are marked on a Ramachandran plot as shown above. Which of the following statements is CORRECT? […]
Restrictions in the Ramachandran Plot
The Ramachandran plot graphically shows which combination of torsional angles phi (φ) and psi (Ψ) of amino acid residues contained in a peptide are possible. Examination of the plot below […]
Understanding Peptides in the Ramachandran Plot
Choose the correct statement about peptides in Ramchandran plot. (1) Peptides that are unstructured will have all the backbone dihedral angles in the disallowed regions. (2) It is not possible […]
Effect of Pyrrolidine Ring Reduction in Proline on ϕ and Ψ Angles
If the pyrollidine ring of proline is reduced to a linear to a linear form, the new amino acid will have (1) constrained ϕ than proline (2) constrained Ψ than […]


