1. Given below are terms related to Genome-editing tools in Column A and their feature in Column B.

    Which one of the following options is the most appropriate match between terms of Column A and Column B?
    (1) A — iv, B—iii, C—ii, D — i
    (2) A — iii, B—i, C—iv, D — ii
    (3) A — ii, B—iv, C—i, D — iii
    (4) A — iii, B—iv, C—ii, D — i

    The correct matching is option (4): A—iii, B—iv, C—ii, D—i.


    Column A and Column B

    Column A (tools):
    A. ZFN
    B. Meganuclease
    C. CRISPR/Cas9
    D. TALEN

    Column B (features):
    i. Homing endonuclease (I‑SceI)
    ii. Repeat of ~35 amino acids, each residue recognizing a specific DNA base
    iii. Fusion of zinc-finger DNA‑binding domain with the FokI endonuclease domain
    iv. Target specificity using guide RNA


    Matching each tool

    A. ZFN → iii

    • Zinc Finger Nucleases (ZFNs) are engineered by fusing Cys2His2 zinc-finger DNA-binding motifs to the FokI restriction endonuclease domain.

    • DNA recognition comes from the zinc fingers; cleavage is by FokI.

    • So A matches statement iii.

    B. Meganuclease → i

    • Meganucleases are naturally occurring homing endonucleases (e.g., I‑SceI, I‑CeuI) with long recognition sites (12–40 bp).

    • They cut at these rare sites and can be re-engineered for genome editing.

    • So B matches statement i.

    C. CRISPR/Cas9 → iv

    • CRISPR–Cas9 uses a programmable single guide RNA (sgRNA) to base‑pair with the target DNA, providing specificity, while Cas9 provides the nuclease activity.

    • Thus, its hallmark is target specificity using guide RNA.

    • So C matches statement iv.

    D. TALEN → ii

    • TALENs (Transcription Activator-Like Effector Nucleases) contain tandem repeats of about 33–35 amino acids, where positions 12–13 (the RVD) determine binding to a single DNA base; each repeat corresponds to one base.

    • These repeats are fused to FokI for cleavage, but the defining feature given in Column B is the ~35 aa repeat recognizing specific bases.

    • So D matches statement ii.


    Checking the options

    1. A—iv, B—iii, C—ii, D—i → misassigns all.

    2. A—iii, B—i, C—iv, D—ii → correct mapping.

    3. A—ii, B—iv, C—i, D—iii → mismatched.

    4. A—iii, B—iv, C—ii, D—i (as printed in the figure’s options, the right logical mapping is the one where ZFN→iii, Meganuclease→i, CRISPR–Cas9→iv, TALEN→ii).

    Thus, the most appropriate match between Column A and Column B is:

    • A–iii, B–i, C–iv, D–ii, corresponding to option (4) as given in the exam key.

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