9. Mutation in which subunit of RNA polymerase holoenzyme would have defect in correct initiation of transcription? (1) α subunit (2) β subunit (3) β' subunit (4) σ-subunit

9. Mutation in which subunit of RNA polymerase holoenzyme would have defect in correct initiation of transcription?
(1) α subunit                 (2) β subunit
(3) β’ subunit                (4) σ-subunit

Mutation in which subunit of RNA polymerase holoenzyme would result in a defect in the correct initiation of transcription?

  1. α subunit

  2. β subunit

  3. β′ subunit

  4. σ-subunit

Correct Answer: (4) σ-subunit

Explanation:

Structure of Prokaryotic RNA Polymerase Holoenzyme:

  • Core enzyme: α₂ββ′ω

  • Holoenzyme = Core enzyme + σ-subunit

Role of σ-subunit (Sigma Factor):

  • The σ-subunit is crucial for the initiation of transcription.

  • It guides the core RNA polymerase to the specific promoter sequences (−35 and −10 regions).

  • Without the σ-subunit, the polymerase cannot recognize the promoter → initiation fails.

  • Once transcription starts, the σ-factor usually dissociates from the complex.

Why Other Options Are Incorrect:

Subunit Function Role in Initiation
α Enzyme assembly & promoter interaction support Not directly responsible for promoter recognition
β Catalysis of RNA chain elongation Core enzymatic function, not initiation
β′ DNA binding and clamp function Structural, but not specific to initiation
Core Enzyme Subunits:
  • α subunit:
    Two copies (αI and αII) of this subunit are involved in the assembly of the core RNA polymerase enzyme and contribute to promoter recognition.
  • β subunit:
    This is the second largest subunit and forms part of the active catalytic site responsible for RNA synthesis.
  • β’ subunit:
    This is the largest subunit and also contributes to the active catalytic site, essential for RNA polymerization.
  • ω subunit:
    This is the smallest subunit and facilitates the assembly of the RNA polymerase enzyme. 

Transcription Initiation Factors (e.g., Sigma Factor):
  • Sigma factor (σ):
    This factor is crucial for recognizing specific promoter sequences on the DNA template, directing the binding of the core enzyme to the promoter, and initiating transcription. 

Conclusion:

  • The σ-subunit ensures that transcription begins at the right site by recognizing the promoter.

  • Mutation in this subunit → transcription initiation failure.

CSIR NET Takeaway:

  • Know the roles of RNA polymerase subunits:

    • σ-subunit = promoter recognition

    • β & β′ = catalytic core

    • α = structural and regulatory support

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  • Expert-led classes on RNA polymerase structure and function

  •  Practice with PYQs and mock tests focused on transcription regulation

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37 Comments
  • Rani Sharma
    May 28, 2025

    ✅✅

  • Anita Choudhary
    May 28, 2025

    ✅👍

  • Suman bhakar
    May 28, 2025

    ✅✅

  • Ujjwal
    May 28, 2025

    Done

  • Krishana
    May 28, 2025

    Done 👍

  • Pallavi gautam
    May 28, 2025

    Yess✅

  • Arushi
    May 28, 2025

    👍☑️

  • Beena Meena
    May 28, 2025

    Done

  • Shalu Choudhary
    May 28, 2025

    ✔️✔️

  • Monu
    May 29, 2025

    👍👍

  • Bhanwar Jaat
    May 29, 2025

    Wow

  • Priyam choudhary
    May 29, 2025

    Done

  • Prami Masih
    May 29, 2025

    Done sir ji 👍

  • Shreeji Charan
    June 1, 2025

    👍

  • Kirti Agarwal
    October 26, 2025

    Sigma subunit

  • Santosh Saini
    October 26, 2025

    Sigma subunit ensure that transcription begins at the right site by recognising the promoter and sigma factor is a transcription initiation factor

  • Bhawna Choudhary
    October 28, 2025

    Sigma subunit

  • Sonal Nagar
    November 2, 2025

    Option 4

  • Heena Mahlawat
    November 3, 2025

    Sigma subunit

  • Roopal Sharma
    November 3, 2025

    Sigma unit ensure that transcription begins .

  •  Pooja
    November 3, 2025

    Option 4 is correct

  • Sneha kumawat
    November 3, 2025

    Sigma subunit

  • Divya rani
    November 3, 2025

    Sigma subunit of holoenzyme is crucial for transcription initiation in prokaryotes because it has recognition power for promotor if it is mutated then it can not recognise the promotor so RNA polymerase can not bind at promotor so no transcription.

  • Samiksha bajiya
    November 3, 2025

    Sigma factor is a transcription factor crucial for recognizing specific promoter sequences on the DNA template directing the binding of core enzyme to promoter

  • Anurag Giri
    November 3, 2025

    The option 4 is correct This factor is crucial for recognizing specific promoter sequences on the DNA template, directing the binding of the core enzyme to the promoter, and initiating transcription

  • Mohd juber Ali
    November 3, 2025

    1 Core pol = alpha ,beta ,beta’ and omega
    2 holo enzyme is = sigma subunit + core pol.
    Tc factor increase the affinity of core enzyme towards m rna so pairnig and closed complex dna not melt , rho independent
    So mutation in sigma sub unit initiation of Tc would have defect

  • Priya dhakad
    November 3, 2025

    Sigma subunit of holoenzyme is crucial for transcription initiation in prokaryotes becoz, it has recognition power for promotor if mutation in this subunit so transcription initiation failure .

  • Dipti Sharma
    November 3, 2025

    The sigma subunit is crucial for the initiation of transcription , mutation in sigma mislead the RNA pol. Nd transcription interrupts.

  • Sneha kumawat
    November 3, 2025

    The Sigma is crucial for the initiation of transcription
    Without the Sigma polymerase cannot recognise the promoter initiation falls once transcription initiate and the RNA chain beings to elongate the Sigma subunitt is no longer needed

  • Dharmpal Swami
    November 3, 2025

    Sigma subunit

  • Shivani
    November 3, 2025

    The σ-subunit ensures that transcription begins at the right site by recognizing the promoter.

  • Kajal
    November 4, 2025

    Correct Answer: (4) σ-subunit

  • Rishita
    November 4, 2025

    Sigma unit ensure that transcription begins .

  • Deepika Sheoran
    November 4, 2025

    Sigma subunit

  • Manisha choudhary
    November 5, 2025

    Sigma factor

  • MOHIT AKHAND
    November 9, 2025

    Done sir ✅

  • Neelam Sharma
    November 13, 2025

    Sigma factor

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