Randomly amplified polymorphic DNA

 

Which of the following techniques would allow a researcher to determine the genetic relatedness between two samples of DNA?
a. Inverse PCR
b. Reverse transcriptase PCR
c. Overlap PCR
d. Randomly amplified polymorphic DNA

 

Correct Answer:(d) Randomly amplified polymorphic DNA

 


Explanation

Determining genetic relatedness between two DNA samples requires a technique that identifies variations or polymorphisms in the DNA sequences. Randomly Amplified Polymorphic DNA (RAPD) is a powerful method for comparing DNA samples and assessing genetic diversity because it detects genetic polymorphisms using randomly designed primers.


🔬 1. What is Randomly Amplified Polymorphic DNA (RAPD)?

  • RAPD is a PCR-based technique used to amplify random segments of genomic DNA using short, arbitrary primers.
  • It identifies polymorphisms (genetic variations) between samples by generating a unique set of DNA fragments (or bands) after PCR amplification.
  • Differences in the banding patterns are analyzed to determine the degree of genetic similarity or divergence between two DNA samples.

2. Why the Other Options Are Incorrect

Option Explanation True/False
(a) Inverse PCR Used for amplifying sequences flanking a known region of DNA, not for determining genetic relatedness. ❌ False
(b) Reverse transcriptase PCR Used for amplifying RNA by reverse transcribing it into cDNA, not for assessing genetic relatedness. ❌ False
(c) Overlap PCR Used for joining two DNA fragments with overlapping sequences, not for determining relatedness. ❌ False
(d) Randomly amplified polymorphic DNA (RAPD) Detects polymorphisms by generating unique DNA fragment patterns, which helps compare genetic diversity. ✅ True

🧪 3. How RAPD Works

Step 1: Primer Selection

  • Short (usually 10 base pairs) and arbitrary primers are used.
  • The primers bind to multiple random sites in the genome.

Step 2: PCR Amplification

  • PCR amplifies the fragments where primers have successfully bound.
  • Amplification creates multiple DNA fragments of varying lengths.

Step 3: Gel Electrophoresis

  • The amplified fragments are separated using agarose gel electrophoresis.
  • Each sample produces a distinct banding pattern based on its genetic makeup.

Step 4: Band Comparison

  • Band patterns from different DNA samples are compared.
  • Similar patterns indicate genetic similarity; differences suggest genetic divergence.

🏆 4. Why RAPD is Effective for Genetic Relatedness

Polymorphisms – RAPD identifies variations at multiple loci across the genome.
Random Binding – Since primers are random, the patterns reflect unique genetic differences.
Cost-Effective – RAPD does not require prior sequence knowledge.
Wide Application – Useful in plant breeding, evolutionary studies, and population genetics.


🌟 5. Applications of RAPD

1. Genetic Mapping:

  • Creating genetic linkage maps for plants and animals.

2. Evolutionary Studies:

  • Comparing genetic diversity within and between species.

3. Population Genetics:

  • Determining genetic structure and gene flow in populations.

4. Breeding and Agriculture:

  • Identifying desirable traits in crops.

🌡️ 6. Limitations of RAPD

Low Reproducibility – Banding patterns can vary between experiments.
Dominant Markers – RAPD cannot distinguish between homozygous and heterozygous loci.
Short Primers – The short primer length increases the risk of non-specific binding.


🔎 7. How RAPD Differs from Other PCR Techniques

Technique Purpose
Standard PCR Amplify known DNA sequences.
Inverse PCR Amplify DNA regions flanking a known sequence.
RT-PCR Detect gene expression by converting RNA to cDNA.
Overlap PCR Join two DNA fragments with overlapping regions.
RAPD Assess genetic diversity and relatedness between samples.

Summary

  • RAPD is a powerful method for analyzing genetic relatedness between DNA samples.
  • It generates unique banding patterns through random primer binding and PCR amplification.
  • Differences in band patterns reflect genetic differences and relatedness.
  • ✅ Correct Answer: (d) Randomly amplified polymorphic DNA
72 Comments
  • Akshay mahawar
    March 17, 2025

    Done 👍

  • Suman bhakar
    March 20, 2025

    • Mahima Sharma
      August 24, 2025

      Rapd (random amplified polymorphic dna

  • Parul
    March 23, 2025

    Done sir

  • Ujjwal
    March 26, 2025

    ✔️👍

  • Soniya Shekhawat
    August 24, 2025

    RAPD PCR is used for genetical diversity and relatedenss the two species.

  • Khushi Pareek
    August 24, 2025

    RAPD

  • Mohd juber Ali
    August 24, 2025

    RAPD PCR
    Use arbitrary primer (short primer) for Amplifying random segment of genomic DNA also used to relate two different dna sample the sequence is unknown

  • Sakshi yadav
    August 24, 2025

    RAPD – PCR for the realatdenes of DNA samples and the sequence of target DNA is not known

  • Arushi Saini
    August 24, 2025

    RAPD

  • Mansukh Kapoor
    August 24, 2025

    The correct answer is option 4th
    Randomly amplified polymorphic DNA (RAPD)
    It used for genetical diversity and relatedness the two species

  • Avni
    August 24, 2025

    (d) Randomly amplified polymorphic DNA (RAPD) because it detects polymorphisms by generating unique DNA fragment patterns, which helps compare genetic diversity

  • Neha Yadav
    August 24, 2025

    RAPD- PCR Technique used for comparing the genetic diversity

  • Roopal Sharma
    August 24, 2025

    Random amplification of polymorphic dna help in recognising genetic diversity and relatedness btw dna

  • karishma don
    August 24, 2025

    genetic similarity or difference is seen by the gel bands by RAPD after giving short primers

  • Khushi Agarwal
    August 24, 2025

    Correct answer is RAPD

  • Anurag Giri
    August 24, 2025

    Ans d
    Bcoz Randomly Amplified Polymorphic DNA (RAPD) is a powerful method for comparing DNA samples and assessing genetic diversity

  • Aafreen Khan
    August 24, 2025

    Random Amplified Polymorphic DNA helps to compare genetic diversity. It detects genetic polymorphisms using randomly designed primers.

  • Dharmpal Swami
    August 24, 2025

    RAPD -which help compare genetic diversity

  • Aakanksha Sharma
    August 24, 2025

    Rapd

  • Dipti Sharma
    August 24, 2025

    RAPD Detects polymorphisms by generating unique DNA fragment patterns.

  • Priyanka Choudhary
    August 24, 2025

    Randomly amplified polymorphic DNA_ help of comppare genetic diversity

  • Karishma
    August 24, 2025

    Rapd

  • HIMANI FAUJDAR
    August 24, 2025

    Ans RAPD( Random amplified polymorphism DNA) help in compare of genetic diversity.

  • Priya dhakad
    August 24, 2025

    Detects polymorphisms by generating unique DNA fragment patterns, which helps compare genetic diversity.so RAPD is used.

  • AKANKSHA RAJPUT
    August 24, 2025

    (d) Randomly amplified polymorphic DNA (RAPD)

  • anjani sharma
    August 24, 2025

    Detects polymorphisms by generating unique DNA fragment patterns, which helps compare genetic diversity.
    Answer 4

  • Sneha Kumawat
    August 24, 2025

    Rapd determining genetic relatedness between two DNA samples

  • Heena Mahlawat
    August 24, 2025

    Rapd produces unique dna patterns to compare

  • Tanvi Panwar
    August 24, 2025

    RAPD helps in recognising genetic relatedness in DNA.

  • MOHIT AKHAND
    August 24, 2025

    Done sir ✅

  • Ayush Dubey
    August 24, 2025

    Randomly Amplified Polymorphic DNA (RAPD)

  • Santosh Saini
    August 24, 2025

    RAPD for detection of DNA by generating unique DNA fragments pattern (low stringency) which helps compare genetic diversity , and Short primer (Arbitrary) are used in RAPD PCR

  • Neelam Sharma
    August 24, 2025

    Randomly amplified polymorphic DNA (RAPD)
    It used for genetical diversity and relatedness the two species

  • Aman Choudhary
    August 24, 2025

    RAPD helps in compare genetic diversity

  • Bharti Yadav
    August 24, 2025

    Randomly amplified polymorphic DNA used for relatedness of two species and genetical diversity

  • Bhawna Choudhary
    August 24, 2025

    RAPD is the correct answer

  • Priyanka Verma
    August 24, 2025

    RAPD is correct answer because it detects genetic polymorphisms using randomly designed primers.

  • Monika jangid
    August 24, 2025

    Rapd is a method for comparing samples

  • Varsha Tatla
    August 25, 2025

    Rapd

  • Divya rani
    August 25, 2025

    D is the answer because polymorphism of different DNA sequence are compared with the help of RAPD and AFLP pcr.

  • shruti sharma
    August 25, 2025

    RAdP

  • Payal Gaur
    August 25, 2025

    Genetic difference and relatedness is identify by RAPD (random amplified of polymorphic DNA)and short primer (arbitrary primer) used in RAPD.

  • Bhavana kankhedia
    August 26, 2025

    Randomly amplified polymorphic DNA

  • Surendra Doodi
    August 26, 2025

    RAPD is a PCR-based technique used to amplify random segments of genomic DNA using short, arbitrary primers.

  • Vanshika Sharma
    August 26, 2025

    RAPD is uses for genetic diversity and relatedness

  • Minal Sethi
    August 26, 2025

    RAPD helps in determining genetic relatedness and polymorphism in the DNA sequences

  • Shivani
    August 26, 2025

    RAPD pcr.

  • Manisha
    August 26, 2025

    Done ✅

  • Rishita
    August 26, 2025

    RAPD

  • Alec
    August 26, 2025

    Randomly amplified polymorphic dna (RAPD) is used to compare dna samples for relatedness and genetic diversity.

  • Devika
    August 26, 2025

    RAPD

  • Simran Saini
    August 26, 2025

    Randomly amplified polymorphic DNA.

  • Seema
    August 27, 2025

    Done

  • Rakesh Dhaka
    August 27, 2025

    RAPD PCR

  • Sakshi Kanwar
    August 27, 2025

    RAPD random amplified polymorphic DNA compare relatedness and genetic diversity

  • Mitali saini
    August 28, 2025

    Correct Answer: ✅ (d) Randomly amplified polymorphic DNA

  • Mitali saini
    August 28, 2025

    Correct Answer: (d) Randomly amplified polymorphic DNA

  • Kanica Sunwalka
    August 28, 2025

    rapd

  • Nilofar Khan
    August 28, 2025

    Correct answer is d.
    Randomly amplified polymorphic DNA.

  • Komal Sharma
    August 28, 2025

    Determining genetic relatedness between two DNA samples requires a technique that identifies variations or polymorphisms in the DNA sequences. Randomly Amplified Polymorphic DNA (RAPD)

  • Deepika Sheoran
    August 28, 2025

    Option D is correct
    RAPD(Random Amplified polymorphic DNA)
    Detects genetic polymorphisms using Randomly designed Primers..

  • Kajal
    August 28, 2025

    Genetic relatedness between 2sample of dna will be identified by the random amplification of polymorphic dna so option b is correct

  • Neeraj Sharma
    August 28, 2025

    RAPD

  • Anisha Beniwal
    August 28, 2025

    Option D is correct

  • Khushi Vaishnav
    August 28, 2025

    Randomly Amplified Polymorphic DNA (RAPD)

  • Asha Gurzzar
    August 30, 2025

    D is correct rapd random amplified polymorphic dna

  • Khushi Singh
    August 30, 2025

    RAPD

  • Sonam Saini
    August 30, 2025

    option d is right

  • Kajal
    August 31, 2025

    Correct Answer is (d) Randomly amplified polymorphic DNA

  • Konika Naval
    August 31, 2025

    Randomly amplified polymorphic DNA

  • Muskan Yadav
    September 8, 2025

    Randomly amplified polymorphic DNA is correct

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